STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000031442annotation not available (88 aa)    
Predicted Functional Partners:
PRPF19
Pre-mRNA-processing factor 19.
    
   0.867
JUP
LOW QUALITY PROTEIN: junction plakoglobin.
   
   0.867
CDC40
Pre-mRNA-processing factor 17.
    
 
 0.867
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
    
   0.866
CDC5L
Cell division cycle 5-like protein.
    
   0.866
WDR25
WD repeat-containing protein 25 isoform X1.
    
   0.722
CTNNB1
LOW QUALITY PROTEIN: catenin beta-1.
   
   0.595
RTF2
Protein RTF2 homolog.
      
 0.493
SMU1
WD40 repeat-containing protein SMU1.
      
 0.459
GPATCH11
G patch domain-containing protein 11 isoform X1.
    
 
 0.458
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.