STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKDREJPolycystic kidney disease and receptor for egg jelly-related protein. (2238 aa)    
Predicted Functional Partners:
PKD2L2
Polycystic kidney disease 2-like 2 protein isoform X1.
    
0.699
PKD2
Polycystin-2 isoform X1.
    
0.693
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
    
0.693
RTF2
Protein RTF2 homolog.
   
  
 0.659
MYOT
Myotilin.
    
 0.608
CUNH9orf131
Uncharacterized protein C9orf131 homolog.
    
 
 0.587
ACRBP
Acrosin-binding protein isoform X1.
      
 0.557
ZP2
Zona pellucida sperm-binding protein 2.
      
 0.547
CDPF1
Cysteine-rich DPF motif domain-containing protein 1.
 
    
 0.520
ODF3
Outer dense fiber protein 3.
      
 0.517
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.