STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNAB3Potassium voltage-gated channel Shaker-related subfamily A, beta member 3. (426 aa)    
Predicted Functional Partners:
NUP133
Nuclear pore complex protein Nup133.
   
 0.735
NUP107
Nuclear pore complex protein Nup107.
   
 0.721
NUP85
Nuclear pore complex protein Nup85 isoform X1.
    
 0.675
SEH1L
Nucleoporin SEH1 isoform X1.
    
 0.672
AGXT
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
   
 
  0.650
ENSPCIP00000003632
Uncharacterized protein LOC110207352.
   
 0.648
NCOA5
Nuclear receptor coactivator 5 isoform X1.
   
 0.648
NUP98
LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96.
   
 0.648
SEC13
Protein SEC13 homolog isoform X1.
    
 0.616
ENSPCIP00000046094
annotation not available
    
 0.616
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.