STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THSD7BLOW QUALITY PROTEIN: thrombospondin type-1 domain-containing protein 7B. (1584 aa)    
Predicted Functional Partners:
PGLYRP4
Peptidoglycan recognition protein 3-like.
      
 0.614
NLGN3
LOW QUALITY PROTEIN: neuroligin-3.
    
 
 0.567
SLC35F1
Solute carrier family 35, member F1/2.
   
  
 0.431
SNTG2
Gamma-2-syntrophin isoform X1.
      
 0.428
SNTG1
Syntrophin gamma 1.
      
 0.428
EXD3
Exonuclease mut-7 homolog isoform X1.
      
 0.418
RGL2
LOW QUALITY PROTEIN: ral guanine nucleotide dissociation stimulator-like 2.
      
 0.412
MAP3K19
Mitogen-activated protein kinase kinase kinase 19 isoform X1.
      
 0.408
CLDN8
Claudin-8.
      
 0.408
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.