STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA3Carbonic anhydrase 3 isoform X1. (260 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.608
CABIN1
Calcineurin-binding protein cabin-1 isoform X1.
   
  
 0.586
STK40
LOW QUALITY PROTEIN: serine/threonine-protein kinase 40.
      
 0.559
RPL5
60S ribosomal protein L5 isoform X1.
    
 
 0.532
GRWD1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.510
RRS1
Ribosome biogenesis regulatory protein homolog.
   
 
 0.507
GTPBP4
Nucleolar GTP-binding protein 1 isoform X1.
   
  
 0.452
CA7
Carbonic anhydrase 7 isoform X1.
  
  
0.447
RRP12
Ribosomal RNA-processing protein 12.
   
  
 0.442
WDR43
WD repeat domain 43.
   
    0.441
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.