STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOBEC1C->U-editing enzyme APOBEC-1. (236 aa)    
Predicted Functional Partners:
APOBEC4
Putative C->U-editing enzyme APOBEC-4 isoform X1.
     
 0.891
A1CF
APOBEC1 complementation factor isoform X1.
    
 0.837
APOB
Apolipoprotein B-100 isoform X1.
      
 0.750
RBM47
RNA-binding protein 47 isoform X1.
    
 0.624
TDG
G/T mismatch-specific thymine DNA glycosylase isoform X1.
      
 0.600
APOBEC2
LOW QUALITY PROTEIN: C->U-editing enzyme APOBEC-2.
    
0.596
UNG
Uracil-DNA glycosylase isoform X1.
     
 0.500
ENSPCIP00000024703
annotation not available
      
 0.493
CDA
Cytidine deaminase.
      
 0.493
MOG
Myelin-oligodendrocyte glycoprotein isoform X1.
  
     0.473
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.