STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AICDASingle-stranded DNA cytosine deaminase isoform X1. (198 aa)    
Predicted Functional Partners:
ENSPCIP00000051422
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.944
CYC1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 0.916
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
   
 0.906
ENSPCIP00000000347
Ubiquinol-cytochrome c reductase subunit 8.
   
 0.898
ENSPCIP00000043382
Cytochrome b-c1 complex subunit 6, mitochondrial.
   
 0.892
ENSPCIP00000002969
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.889
ENSPCIP00000032488
annotation not available
   
 0.889
CBFB
Core-binding factor subunit beta isoform X1.
    
 
 0.874
COX2
Cytochrome c oxidase subunit II.
   
 0.860
COX1
Cytochrome c oxidase subunit 1.
   
 0.851
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.