STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMBRD1Probable lysosomal cobalamin transporter. (542 aa)    
Predicted Functional Partners:
ABCD4
ATP-binding cassette, subfamily D (ALD), member 4.
    
 0.934
ABCD3
ATP-binding cassette sub-family D member 3 isoform X1.
    
 0.755
MMADHC
Methylmalonic aciduria and homocystinuria type D homolog, mitochondrial.
      
 0.697
MMAA
Metabolism of cobalamin associated A.
      
 0.659
MMACHC
Cyanocobalamin reductase (cyanide-eliminating) / alkylcobalamin dealkylase.
      
 0.656
MTR
5-methyltetrahydrofolate--homocysteine methyltransferase.
      
 0.611
ABCD1
ATP-binding cassette, subfamily D (ALD), member 1.
    
 0.611
ABCD2
LOW QUALITY PROTEIN: ATP-binding cassette sub-family D member 2.
    
 0.611
MMAB
Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial isoform X1.
      
 0.609
MTRR
Methionine synthase reductase.
      
 0.584
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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