STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHS1Pleckstrin homology domain-containing family S member 1 isoform X1. (533 aa)    
Predicted Functional Partners:
WDR74
Ribosome biogenesis protein NSA1.
      
 0.558
CCDC186
Coiled-coil domain-containing protein 186 isoform X1.
      
 0.502
ZDHHC6
Palmitoyltransferase ZDHHC6.
      
 0.501
NHLRC2
LOW QUALITY PROTEIN: NHL repeat-containing protein 2.
      
 0.499
TECTB
Beta-tectorin.
      
 0.499
VTI1A
Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.
      
 0.461
RBPMS2
RNA-binding protein with multiple splicing 2.
      
 0.461
ENSPCIP00000054417
annotation not available
      
 0.461
DCLRE1A
DNA cross-link repair 1A protein.
      
 0.416
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.