STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUBP3Far upstream element-binding protein 3 isoform X1. (574 aa)    
Predicted Functional Partners:
PUF60
Poly(U)-binding-splicing factor PUF60 isoform X1.
   
 
 0.642
ENSPCIP00000036195
annotation not available
   
 
 0.642
QKI
Protein quaking isoform X1.
   
 
 0.633
KHDRBS2
KH domain-containing, RNA-binding, signal transduction-associated protein 2 isoform X1.
   
 
 0.602
KHDRBS1
LOW QUALITY PROTEIN: KH domain-containing, RNA-binding, signal transduction-associated protein 1.
   
 
 0.590
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.585
KHDC4
UPF0469 protein KIAA0907 homolog isoform X1.
      
 0.561
KHDRBS3
KH domain-containing, RNA-binding, signal transduction-associated protein 3 isoform X1.
   
 
 0.550
PRRC2C
Proline rich coiled-coil 2C.
   
 
 0.530
PARN
Poly(A)-specific ribonuclease PARN isoform X1.
   
 0.529
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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