STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000033131Dual specificity protein phosphatase 13-like. (298 aa)    
Predicted Functional Partners:
VRK3
Inactive serine/threonine-protein kinase VRK3 isoform X1.
    
 0.483
SMIM12
Small integral membrane protein 12.
   
 
 0.445
MTHFSD
Methenyltetrahydrofolate synthase domain-containing protein isoform X1.
   
    0.439
UTP15
LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 15 homolog.
   
  
 0.435
NPAS4
Neuronal PAS domain-containing protein 4.
   
    0.410
NMD3
Nonsense-mediated mRNA decay protein 3.
   
 
 0.410
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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