STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB26LOW QUALITY PROTEIN: ras-related protein Rab-26. (190 aa)    
Predicted Functional Partners:
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha isoform X1.
    
 0.722
RABGGTB
Geranylgeranyl transferase type-2 subunit beta.
    
  0.687
PTAR1
Protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X1.
    
 0.657
ATG16L1
Autophagy-related protein 16-1 isoform X1.
    
 
 0.601
ENSPCIP00000003143
annotation not available
    
 0.595
ENSPCIP00000034016
Rab proteins geranylgeranyltransferase component A 1-like.
    
 0.595
RAB5B
Ras-related protein Rab-5B.
  
 
 0.427
TBC1D5
TBC1 domain family member 5.
      
 0.420
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.