STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF139LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF139. (653 aa)    
Predicted Functional Partners:
OS9
Protein OS-9 isoform X1.
   
 0.791
ERLEC1
Endoplasmic reticulum lectin 1.
   
 0.789
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2 isoform X1.
   
 0.787
DERL1
Derlin-1.
    
 0.733
DERL3
Derlin-3 isoform X1.
    
 0.717
DERL2
Derlin-2/3.
    
 0.717
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 0.703
VCP
Transitional endoplasmic reticulum ATPase isoform X1.
    
 0.703
SPATA5
Spermatogenesis-associated protein 5 isoform X1.
    
 0.703
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
    
 
 0.679
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.