STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNFF-box protein 1 (cyclin F). (786 aa)    
Predicted Functional Partners:
CUL1
Cullin 1.
    
 0.924
SKP1
S-phase kinase-associated protein 1.
    
 0.867
ENSPCIP00000039170
annotation not available
    
 0.867
SKP2
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2).
   
 0.841
ENSPCIP00000026820
annotation not available
    
 0.806
BUB1B
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta isoform X1.
   
 0.806
ESPL1
Separase.
   
  
 0.805
CCP110
Centriolar coiled-coil protein of 110 kDa isoform X1.
    
 
 0.794
CDC6
LOW QUALITY PROTEIN: cell division control protein 6 homolog.
   
 0.765
CDC20B
Cell division cycle protein 20 homolog B.
   
 0.751
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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