STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB1EF-hand calcium-binding domain-containing protein 1 isoform X1. (239 aa)    
Predicted Functional Partners:
C9orf116
UPF0691 protein C9orf116 homolog isoform X1.
    
 
 0.862
ARMC3
Armadillo repeat-containing protein 3 isoform X1.
   
 
 0.815
ARMC4
Armadillo repeat-containing protein 4 isoform X1.
  
 
 0.776
EFHC2
EF-hand domain-containing family member C2 isoform X1.
   
 
 0.751
CCDC114
Coiled-coil domain-containing protein 114.
    
 
 0.738
IQUB
IQ motif and ubiquitin domain containing.
   
 0.730
CCDC151
Coiled-coil domain-containing protein 151 isoform X1.
   
 0.707
ENSPCIP00000051069
annotation not available
    
 
 0.704
C4orf47
UPF0602 protein C4orf47 homolog isoform X1.
      
 0.698
EFCAB6
EF-hand calcium-binding domain-containing protein 6.
   
 0.695
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.