STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP2A1Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 isoform X1. (1001 aa)    
Predicted Functional Partners:
PLN
Cardiac phospholamban.
   
 0.992
HRC
Sarcoplasmic reticulum histidine-rich calcium-binding protein.
   
 
 0.936
SLN
Sarcolipin.
   
 
 0.930
TNNI2
Troponin I, fast skeletal muscle isoform X1.
   
 0.920
TNNC2
Troponin C, skeletal muscle isoform X1.
   
 
 0.916
ATP2A2
LOW QUALITY PROTEIN: sarcoplasmic/endoplasmic reticulum calcium ATPase 2.
  
  
0.909
ATP2A3
LOW QUALITY PROTEIN: sarcoplasmic/endoplasmic reticulum calcium ATPase 3.
  
 
 
0.903
KAT5
Histone acetyltransferase KAT5 isoform X1.
    
 0.902
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 
 0.807
RYR1
Ryanodine receptor 1.
   
 
 0.758
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.