STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACTINCactin. (775 aa)    
Predicted Functional Partners:
PRKRIP1
PRKR-interacting protein 1.
    
 0.933
TIMM10
Mitochondrial import inner membrane translocase subunit TIM10.
   
 0.930
DHX8
ATP-dependent RNA helicase DHX8 isoform X1.
    
 0.907
SLU7
Pre-mRNA-processing factor SLU7.
    
 0.901
CDC5L
Cell division cycle 5-like protein.
    
 
 0.878
CRNKL1
Crooked neck-like protein 1.
    
 
 0.878
FAM32A
Protein FAM32A.
    
 0.871
SDE2
Protein SDE2 homolog.
    
 0.870
PRPF8
Pre-mRNA-processing-splicing factor 8.
 
  
 
 0.868
CDC40
Pre-mRNA-processing factor 17.
    
 0.857
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.