STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHSRPFar upstream element-binding protein 2 isoform X1. (749 aa)    
Predicted Functional Partners:
PARN
Poly(A)-specific ribonuclease PARN isoform X1.
   
 0.748
HNRNPL
LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein L.
   
 
 0.722
PUF60
Poly(U)-binding-splicing factor PUF60 isoform X1.
   
 
 0.709
ENSPCIP00000036195
annotation not available
   
 
 0.709
DROSHA
Ribonuclease 3 isoform X1.
   
 
 0.701
DICER1
LOW QUALITY PROTEIN: endoribonuclease Dicer.
    
 
 0.668
KHDRBS1
LOW QUALITY PROTEIN: KH domain-containing, RNA-binding, signal transduction-associated protein 1.
   
 
 0.660
U2AF2
Splicing factor U2AF 65 kDa subunit isoform X1.
   
 
 0.618
KHDRBS2
KH domain-containing, RNA-binding, signal transduction-associated protein 2 isoform X1.
   
 
 0.610
PUM2
Pumilio RNA binding family member 2.
   
 
 0.596
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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