STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP50Inactive ubiquitin carboxyl-terminal hydrolase 50 isoform X1. (379 aa)    
Predicted Functional Partners:
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 
 0.595
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
      
 0.562
MRPL21
39S ribosomal protein L21, mitochondrial isoform X1.
   
 
 0.515
MRPS9
28S ribosomal protein S9, mitochondrial isoform X1.
   
 
 0.510
MRPS16
28S ribosomal protein S16, mitochondrial isoform X1.
   
 
 0.502
MRPL3
39S ribosomal protein L3, mitochondrial.
   
 
 0.498
MRPS14
28S ribosomal protein S14, mitochondrial isoform X1.
    
 
 0.474
MRPL4
39S ribosomal protein L4, mitochondrial.
   
 
 0.471
MRPL13
39S ribosomal protein L13, mitochondrial isoform X1.
   
 
 0.449
MRPS12
28S ribosomal protein S12, mitochondrial.
   
 
 0.443
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.