STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSH2DNA mismatch repair protein MSH2. (934 aa)    
Predicted Functional Partners:
MSH3
LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3.
  
0.999
MSH6
DNA mismatch repair protein MSH6.
  
0.999
MLH1
DNA mismatch repair protein Mlh1 isoform X1.
 
 0.995
PMS2
Mismatch repair endonuclease PMS2 isoform X1.
 
 0.994
EXO1
Exonuclease 1.
   
 0.990
PCNA
Proliferating cell nuclear antigen.
   
 0.987
PMS1
LOW QUALITY PROTEIN: PMS1 protein homolog 1.
 
 0.979
FEN1
Flap endonuclease 1.
   
 0.944
MLH3
LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3.
  
 0.926
POLD1
DNA polymerase delta catalytic subunit isoform X1.
   
 
 0.910
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.