STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM71Tripartite motif containing 71. (974 aa)    
Predicted Functional Partners:
AGO2
Eukaryotic translation initiation factor 2C.
    
 
 0.626
RNF181
E3 ubiquitin-protein ligase RNF181.
     
 0.582
BBOX1
Gamma-butyrobetaine dioxygenase.
      
 0.461
LIN28A
Protein lin-28 homolog A.
   
 
 0.452
TENM1
Teneurin-1 isoform X1.
      
 0.406
UBC
LOW QUALITY PROTEIN: polyubiquitin-C.
   
 0.400
ENSPCIP00000043051
LOW QUALITY PROTEIN: polyubiquitin-C-like.
   
 0.400
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.