STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC117Coiled-coil domain-containing protein 117 isoform X1. (276 aa)    
Predicted Functional Partners:
AP4E1
AP-4 complex subunit epsilon-1 isoform X1.
      
 0.610
GGPS1
Geranylgeranyl pyrophosphate synthase isoform X1.
      
 0.610
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
      
 0.609
VEPH1
Ventricular zone-expressed PH domain-containing protein homolog 1 isoform X1.
      
 0.600
NCAPH
Condensin complex subunit 2 isoform X1.
      
 0.590
MEGF11
Multiple epidermal growth factor-like domains protein 11 isoform X1.
      
 0.580
SLC16A4
MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 4.
      
 0.565
CHEK2
Serine/threonine-protein kinase Chk2 isoform X1.
      
 0.564
GYPC
Glycophorin-C isoform X1.
      
 0.556
PTAFR
Platelet-activating factor receptor.
      
 0.554
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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