STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCN2ASodium channel protein type 2 subunit alpha isoform X1. (2008 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.984
HCN4
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4.
   
 0.905
CALHM1
Calcium homeostasis modulator protein 1.
   
 
 0.903
ENSPCIP00000035222
Sodium channel protein type 9 subunit alpha isoform X1.
  
  
 
0.901
SCN3A
Sodium channel protein type 3 subunit alpha isoform X1.
  
  
 
0.900
SCN2B
Voltage-gated sodium channel type II beta.
   
 0.801
SCN1B
Sodium channel subunit beta-1 isoform X1.
   
 0.765
IFT122
Intraflagellar transport protein 122 homolog isoform X1.
   
 0.609
FGF13
Fibroblast growth factor 13 isoform X1.
    
 
 0.605
IFT140
LOW QUALITY PROTEIN: intraflagellar transport protein 140 homolog.
    
 0.596
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.