STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUNH16orf71LOW QUALITY PROTEIN: uncharacterized protein C16orf71 homolog. (417 aa)    
Predicted Functional Partners:
MRPS10
28S ribosomal protein S10, mitochondrial.
   
 0.798
MRPS16
28S ribosomal protein S16, mitochondrial isoform X1.
  
 0.788
MRPS6
28S ribosomal protein S6, mitochondrial.
   
  0.771
MRPS12
28S ribosomal protein S12, mitochondrial.
   
 0.769
MRPS9
28S ribosomal protein S9, mitochondrial isoform X1.
  
  0.755
MRPS11
28S ribosomal protein S11, mitochondrial.
   
 0.748
MRPS22
28S ribosomal protein S22, mitochondrial.
   
 0.748
RPS20
LOW QUALITY PROTEIN: 40S ribosomal protein S20.
   
 0.731
MRPS14
28S ribosomal protein S14, mitochondrial isoform X1.
   
  0.723
MRPS5
28S ribosomal protein S5, mitochondrial isoform X1.
  
  0.710
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.