STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOP3BDNA topoisomerase 3-beta-1 isoform X1. (862 aa)    
Predicted Functional Partners:
ENSPCIP00000046034
annotation not available
   
 0.997
WRN
Werner syndrome ATP-dependent helicase.
  
 0.996
RMI1
RecQ-mediated genome instability protein 1.
    
 0.989
TDRD3
Tudor domain-containing protein 3 isoform X1.
    
 0.986
RPA3
Replication protein A 14 kDa subunit.
    
 0.983
BLM
Bloom syndrome protein.
  
 0.976
RPA1
Replication protein A 70 kDa DNA-binding subunit isoform X1.
   
 0.975
RMI2
RecQ-mediated genome instability protein 2.
    
 0.969
RPA2
Replication protein A 32 kDa subunit isoform X1.
    
 0.953
TOP3A
DNA topoisomerase 3-alpha.
     
0.906
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.