STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSPT1Eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1. (500 aa)    
Predicted Functional Partners:
EEF1G
Elongation factor 1-gamma.
   
 0.998
PAPSS2
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform X1.
 
    
 0.905
PAPSS1
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X1.
 
    
 0.905
VARS1
LOW QUALITY PROTEIN: valine--tRNA ligase.
   
 0.855
ENSPCIP00000014486
annotation not available
   
 0.792
ETF1
Eukaryotic peptide chain release factor subunit 1.
   
 0.792
MARS1
LOW QUALITY PROTEIN: methionine--tRNA ligase, cytoplasmic.
   
 0.792
RPL5
60S ribosomal protein L5 isoform X1.
   
 0.749
RPL4
Large subunit ribosomal protein L4e.
   
 0.743
RPS20
LOW QUALITY PROTEIN: 40S ribosomal protein S20.
  
 0.737
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.