STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAM5Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X1. (337 aa)    
Predicted Functional Partners:
FUNDC1
FUN14 domain-containing protein 1.
     
 0.981
BCL2L1
Bcl-2-like 1 (apoptosis regulator Bcl-X).
    
 0.965
ENSPCIP00000011204
LOW QUALITY PROTEIN: dynamin-1-like protein.
    
 0.936
DNM1L
LOW QUALITY PROTEIN: dynamin-1-like protein.
    
 0.936
KEAP1
Kelch-like ECH-associated protein 1.
    
 
 0.879
FUNDC2
FUN14 domain-containing protein 2.
     
 0.820
PINK1
LOW QUALITY PROTEIN: serine/threonine-protein kinase PINK1, mitochondrial.
    
 
 0.784
BPGM
Bisphosphoglycerate/phosphoglycerate mutase.
      
 0.657
PHB2
Prohibitin-2 isoform X1.
    
 
 0.643
KLHL17
Kelch-like protein 17 (actinfilin).
    
 
 0.636
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.