STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCSK6Proprotein convertase subtilisin/kexin type 6 isoform X1. (966 aa)    
Predicted Functional Partners:
NR1D1
Nuclear receptor subfamily 1 group D member 1.
     
 0.741
TGIF1
Homeobox protein TGIF1.
      
 0.673
HOMER3
Homer protein homolog 3.
   
  
 0.649
THOC2
THO complex subunit 2 isoform X1.
      
 0.632
XPO4
LOW QUALITY PROTEIN: exportin-4.
      
 0.606
PTGS1
Prostaglandin-endoperoxide synthase 1.
   
  
 0.583
GPIHBP1
Glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1.
     
 0.550
GBA
Glucosylceramidase isoform X1.
   
  
 0.520
DAZAP1
DAZ-associated protein 1 isoform X1.
    
 
 0.514
RXFP2
Relaxin family peptide receptor 2.
   
 0.493
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.