STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PABPN1LOW QUALITY PROTEIN: polyadenylate-binding protein 2. (306 aa)    
Predicted Functional Partners:
CSTF2
Cleavage stimulation factor subunit 2 isoform X1.
   
0.953
U2AF2
Splicing factor U2AF 65 kDa subunit isoform X1.
 
 
 0.948
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.939
SRSF2
Serine/arginine-rich splicing factor 2 isoform X1.
  
 
0.922
PABPN1L
Embryonic polyadenylate-binding protein 2.
  
0.921
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16.
   
 0.913
PAPOLA
Poly(A) polymerase alpha isoform X1.
   
 0.909
SLU7
Pre-mRNA-processing factor SLU7.
     
 0.903
PAPOLG
Poly(A) polymerase gamma isoform X1.
   
 0.897
ACIN1
Apoptotic chromatin condensation inducer in the nucleus isoform X1.
   
 0.896
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.