STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF212BRING finger protein 212B isoform X1. (301 aa)    
Predicted Functional Partners:
SPO11
Meiotic recombination protein SPO11 isoform X1.
   
 
 0.692
MSH4
MutS protein homolog 4 isoform X1.
   
 
 0.567
NEK9
NIMA (never in mitosis gene a)-related kinase 9.
      
 0.562
REC8
Meiotic recombination protein REC8, animal type.
    
 
 0.562
MLH3
LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3.
      
 0.561
ENSPCIP00000039523
annotation not available
    
 
 0.528
REC114
Meiotic recombination protein REC114.
    
 
 0.479
CPLX2
Complexin-1/2.
      
 0.476
GCLM
Glutamate--cysteine ligase regulatory subunit.
      
 0.461
HFM1
Helicase for meiosis 1.
      
 0.459
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.