STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXA1LMitochondrial inner membrane protein OXA1L isoform X1. (438 aa)    
Predicted Functional Partners:
SEC61A1
Protein transport protein SEC61 subunit alpha.
   
 0.898
SEC61A2
Protein transport protein Sec61 subunit alpha isoform X1.
   
 0.898
COX2
Cytochrome c oxidase subunit II.
   
 
 0.885
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
  
 
 0.845
MRPL45
39S ribosomal protein L45, mitochondrial.
   
 
 0.839
MRPL17
39S ribosomal protein L17, mitochondrial.
   
 
 0.820
MRPS22
28S ribosomal protein S22, mitochondrial.
   
 
 0.817
MRPL13
39S ribosomal protein L13, mitochondrial isoform X1.
   
 
 0.814
MRPL4
39S ribosomal protein L4, mitochondrial.
   
 
 0.807
MRPL12
39S ribosomal protein L12, mitochondrial.
   
 
 0.791
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.