STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCOLCE2Procollagen C-endopeptidase enhancer 2. (415 aa)    
Predicted Functional Partners:
COL27A1
Collagen alpha-1(XXVII) chain isoform X1.
   
 0.588
AMBN
Ameloblastin.
      
 0.557
GC
GC vitamin D binding protein.
    
 0.534
COL23A1
Collagen alpha-1(XXIII) chain isoform X1.
   
 0.528
COL1A1
Collagen alpha-1(I) chain.
   
 0.527
BMP1
Bone morphogenetic protein 1.
   
0.523
TLL1
Tolloid-like protein 1 isoform X1.
   
0.523
TLL2
Tolloid like 2.
   
0.523
COL1A2
Collagen alpha-2(I) chain.
   
 0.516
COL3A1
Collagen alpha-1(III) chain isoform X1.
   
 0.516
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.