STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABRDGamma-aminobutyric acid receptor subunit delta isoform X1. (452 aa)    
Predicted Functional Partners:
TRAK2
Trafficking kinesin-binding protein 2.
    
 0.920
NSF
Vesicle-fusing ATPase.
   
 
 0.901
PLCL1
LOW QUALITY PROTEIN: inactive phospholipase C-like protein 1.
     
 0.900
GABRB3
Gamma-aminobutyric acid receptor subunit beta-3.
  
 
0.829
GABRA4
LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-4.
  
0.720
GABRA6
Gamma-aminobutyric acid type A receptor alpha6 subunit.
  
0.718
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
     
 0.650
GABARAPL1
Gamma-aminobutyric acid receptor-associated protein-like 1.
     
 0.650
GABARAP
Gamma-aminobutyric acid receptor-associated protein.
     
 0.650
SLC6A1
Solute carrier family 6 (neurotransmitter transporter, GABA) member 1.
   
  
 0.611
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.