STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000039539Ras-related protein Rab-6B-like isoform X1. (75 aa)    
Predicted Functional Partners:
RIC1
RAB6A-GEF complex partner protein 1 isoform X1.
    
 0.848
GCC2
GRIP and coiled-coil domain-containing protein 2 isoform X1.
    
 0.812
VPS39
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39.
    
 
 0.798
ENSPCIP00000027549
LOW QUALITY PROTEIN: rab GDP dissociation inhibitor alpha-like.
   
 0.775
GDI2
Rab GDP dissociation inhibitor beta.
   
 0.775
GDI1
Rab GDP dissociation inhibitor alpha.
   
 0.775
VPS53
Vacuolar protein sorting-associated protein 53 homolog.
    
 0.740
VPS52
Vacuolar protein sorting-associated protein 52 homolog isoform X1.
    
 0.734
COG6
Conserved oligomeric Golgi complex subunit 6.
   
 0.720
BICD2
LOW QUALITY PROTEIN: protein bicaudal D homolog 2-like.
    
 0.713
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.