STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGLYRP4Peptidoglycan recognition protein 3-like. (379 aa)    
Predicted Functional Partners:
THSD7B
LOW QUALITY PROTEIN: thrombospondin type-1 domain-containing protein 7B.
      
 0.614
SYT6
Synaptotagmin-6.
      
 0.566
NLGN3
LOW QUALITY PROTEIN: neuroligin-3.
   
  
 0.558
MITD1
MIT domain-containing protein 1 isoform X1.
      
 0.493
TMEM121
Transmembrane protein 121 isoform X1.
      
 0.489
THSD7A
Thrombospondin type-1 domain-containing protein 7A isoform X1.
      
 0.467
AKAP17A
Splicing factor, arginine/serine-rich 17.
      
 0.461
SERPINF2
Alpha-2-antiplasmin.
      
 0.426
ENSPCIP00000005127
annotation not available
      
 0.418
SNTG2
Gamma-2-syntrophin isoform X1.
      
 0.414
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.