STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISM1Isthmin-1 isoform X1. (463 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase 1.
 
 
 0.955
KDSR
3-ketodihydrosphingosine reductase isoform X1.
     
 0.803
ALAD
Delta-aminolevulinic acid dehydratase.
    
 0.666
ENSPCIP00000013456
annotation not available
  
 
 0.661
SORD
Sorbitol dehydrogenase isoform X1.
  
 
 0.661
SPTSSB
Serine palmitoyltransferase small subunit B.
    
 0.634
ADHFE1
Hydroxyacid-oxoacid transhydrogenase, mitochondrial isoform X1.
    
 0.629
SPTSSA
Serine palmitoyltransferase small subunit A.
    
 0.619
ENSPCIP00000054098
annotation not available
    
 0.619
ORMDL3
ORM1-like protein 3 isoform X1.
    
 
 0.539
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.