STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM8A1Protein FAM8A1. (424 aa)    
Predicted Functional Partners:
SEL1L
Protein sel-1 homolog 1 isoform X1.
    
 
 0.701
SYVN1
Synoviolin 1.
    
 
 0.646
AMFR
E3 ubiquitin-protein ligase AMFR isoform X1.
    
 
 0.634
OS9
Protein OS-9 isoform X1.
    
 
 0.620
HERPUD2
HERPUD family member 2.
    
 
 0.581
ERLEC1
Endoplasmic reticulum lectin 1.
    
 
 0.568
TMUB1
Transmembrane and ubiquitin-like domain-containing protein 1.
      
 0.563
TMED1
Transmembrane emp24 domain-containing protein 1.
      
 0.560
CGRRF1
Cell growth regulator with RING finger domain protein 1 isoform X1.
      
 0.555
TMEM33
Transmembrane protein 33.
      
 0.502
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.