STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRGAP1LOW QUALITY PROTEIN: SLIT-ROBO Rho GTPase-activating protein 1. (1085 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42 homolog isoform X1.
   
 0.948
ROBO1
Roundabout, axon guidance receptor 1.
    
 0.927
SRGAP2
SLIT-ROBO Rho GTPase-activating protein 2 isoform X1.
  
  
 
0.901
ITSN2
Intersectin-2.
   
 0.833
ENSPCIP00000012325
annotation not available
   
 0.711
ITSN1
Intersectin-1 isoform X1.
   
 0.711
WASL
Neural Wiskott-Aldrich syndrome protein.
   
 0.580
WAS
LOW QUALITY PROTEIN: wiskott-Aldrich syndrome protein.
   
 0.560
TSEN2
TRNA-splicing endonuclease subunit Sen2.
    
   0.550
ENSPCIP00000020890
Shootin-1-like isoform X1.
   
 0.545
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.