STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIPSNAP2Protein NipSnap homolog 2 isoform X1. (289 aa)    
Predicted Functional Partners:
MTHFSD
Methenyltetrahydrofolate synthase domain-containing protein isoform X1.
   
    0.625
SMIM12
Small integral membrane protein 12.
   
  
 0.585
RAB40C
Ras-related protein Rab-40C.
   
 
  0.564
SNU13
U4/U6 small nuclear ribonucleoprotein SNU13.
   
    0.534
UTP15
LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 15 homolog.
   
    0.530
WDR6
WD repeat-containing protein 6 isoform X1.
   
    0.529
PSMD1
LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 1.
   
    0.529
NOP56
Nucleolar protein 56.
   
    0.523
NPAS4
Neuronal PAS domain-containing protein 4.
   
    0.523
SMC1B
Structural maintenance of chromosomes 1B.
   
    0.444
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.