STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEMIN8Gem associated protein 8. (235 aa)    
Predicted Functional Partners:
DDX20
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX20.
    
 0.993
GEMIN7
Gem associated protein 7.
    
 0.986
GEMIN2
Gem associated protein 2.
    
 0.955
GEMIN5
Gem associated protein 5.
    
 0.936
GEMIN4
LOW QUALITY PROTEIN: gem-associated protein 4.
    
 0.899
SPATA6L
Spermatogenesis associated 6-like protein isoform X1.
    
 0.816
ENSPCIP00000019914
annotation not available
    
 0.782
ENSPCIP00000037460
annotation not available
    
 0.782
ENSPCIP00000047516
annotation not available
    
 0.782
LSM10
U7 snRNA-associated Sm-like protein LSm10 isoform X1.
     
 0.750
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.