STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH12Protocadherin delta 2. (1196 aa)    
Predicted Functional Partners:
SLITRK4
SLIT and NTRK-like protein 4 isoform X1.
     
 0.503
CDH5
Cadherin 5, type 2, VE-cadherin.
   
  
0.491
PHLDA2
Pleckstrin homology-like domain family A member 2.
      
 0.480
GYG1
Glycogenin-1 isoform X1.
      
 0.470
GJB3
Gap junction beta-3 protein.
      
 0.468
PCSK6
Proprotein convertase subtilisin/kexin type 6 isoform X1.
      
 0.467
GYG2
Glycogenin-2 isoform X1.
      
 0.426
TLE3
Transducin-like enhancer protein 3 isoform X1.
      
 0.424
GBE1
LOW QUALITY PROTEIN: 1,4-alpha-glucan-branching enzyme.
      
 0.405
FLT1
LOW QUALITY PROTEIN: vascular endothelial growth factor receptor 1.
   
 
 0.403
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.