STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG10Ubiquitin-like-conjugating enzyme ATG10 isoform X1. (279 aa)    
Predicted Functional Partners:
ATG7
Ubiquitin-like modifier-activating enzyme ATG7 isoform X1.
   
 0.960
ENSPCIP00000017577
annotation not available
    
 0.943
ATG5
Autophagy protein 5 isoform X1.
    
 0.850
NBR1
Next to BRCA1 gene 1 protein isoform X1.
      
 0.727
ATG3
Ubiquitin-like-conjugating enzyme ATG3.
    
 
 0.716
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
      
 0.705
ATG13
LOW QUALITY PROTEIN: autophagy-related protein 13.
      
 0.705
PIK3R4
Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.
      
 0.705
ATG101
Autophagy-related protein 101 isoform X1.
      
 0.704
RB1CC1
RB1-inducible coiled-coil protein 1 isoform X1.
      
 0.703
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.