STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTA2Actin, aortic smooth muscle. (377 aa)    
Predicted Functional Partners:
MYL9
Myosin regulatory light polypeptide 9.
   
 0.937
MYH10
LOW QUALITY PROTEIN: myosin-10.
   
 0.932
MYH11
Myosin heavy chain 9/10/11/14.
   
 0.932
MYH9
LOW QUALITY PROTEIN: myosin-9.
   
 0.932
MYL6
Myosin light polypeptide 6 isoform X1.
   
 0.928
MYL6B
Myosin light chain 6B.
   
 0.927
MYH14
Myosin heavy chain 9/10/11/14.
    
 0.921
ACTG2
Actin, gamma-enteric smooth muscle.
  
  
 
0.900
ITSN2
Intersectin-2.
     
 0.740
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 0.731
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.