STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJA2E3 ubiquitin-protein ligase Praja-2 isoform X1. (695 aa)    
Predicted Functional Partners:
RSPO2
R-spondin 2.
   
 0.630
MFHAS1
Malignant fibrous histiocytoma-amplified sequence 1.
    
 0.605
RSPO1
R-spondin 1.
   
 0.601
FBXL17
F-box and leucine-rich repeat protein 17.
   
 
 0.587
BAG6
Large proline-rich protein BAG6 isoform X1.
   
 
 0.557
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 
 0.535
LGR4
Leucine-rich repeat-containing G protein-coupled receptor 4.
    
 0.529
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.529
DNAJC16
LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 16.
   
  
 0.515
UBE2K
Ubiquitin-conjugating enzyme (huntingtin interacting protein 2).
   
 0.505
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.