STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP97D1Uncharacterized protein C17orf105 homolog. (164 aa)    
Predicted Functional Partners:
TAF12
Transcription initiation factor TFIID subunit 12 isoform X1.
   
 0.582
TAF10
TATA-box binding protein associated factor 10.
    
 0.573
TEX10
Testis-expressed protein 10 isoform X1.
   
 0.571
TAF2
Transcription initiation factor TFIID subunit 2 isoform X1.
    
 0.562
CPSF1
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.560
ENSPCIP00000036531
annotation not available
   
 0.559
CDC16
Cell division cycle protein 16 homolog.
   
 0.548
PRMT5
Type II protein arginine methyltransferase.
   
 0.544
IFT140
LOW QUALITY PROTEIN: intraflagellar transport protein 140 homolog.
    
 0.543
TAF8
Transcription initiation factor TFIID subunit 8 isoform X1.
    
 0.537
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.