STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000042226annotation not available (68 aa)    
Predicted Functional Partners:
VTI1A
Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.
   
 0.977
VAMP8
Vesicle-associated membrane protein 8.
    
 0.945
STX5
Syntaxin 5.
    
 0.940
YKT6
Synaptobrevin homolog YKT6 isoform X1.
    
 0.939
STX16
Syntaxin-16 isoform X1.
    
 0.939
VTI1B
Vesicle transport through interaction with t-SNAREs homolog 1B.
   
 0.890
VPS51
Vacuolar protein sorting-associated protein 51 homolog.
    
 0.876
VPS45
Vacuolar protein sorting 45 homolog.
    
 
 0.874
SNAP29
Synaptosomal-associated protein 29.
    
 0.856
VAMP3
Vesicle-associated membrane protein 3.
    
 0.851
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.