ENSPCIP00000042425 protein (Phascolarctos cinereus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPCIP00000042425

annotation not available (116 aa)

Predicted Functional Partners:

ABCC10

0.900

ABCC9

0.782

ABCG5

0.514

KATNAL2

0.494

ENSPCIP00000046432

0.466

KCNJ5

0.425

KCNJ4

0.425

KCNJ8

0.425

KCNJ2

0.425

ENSPCIP00000033381

0.425

Your Current Organism:

Phascolarctos cinereus

NCBI taxonomy Id: 38626
Other names: P. cinereus, koala

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCC10	ABCG5	ENSPCIP00000038210	ENSPCIP00000008287	ATP-binding cassette, subfamily C (CFTR/MRP), member 10.	ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1).	0.514
ABCC10	ENSPCIP00000033381	ENSPCIP00000038210	ENSPCIP00000033381	ATP-binding cassette, subfamily C (CFTR/MRP), member 10.	Potassium inwardly-rectifying channel subfamily J member 12/18.	0.425
ABCC10	ENSPCIP00000042425	ENSPCIP00000038210	ENSPCIP00000042425	ATP-binding cassette, subfamily C (CFTR/MRP), member 10.	annotation not available	0.900
ABCC10	ENSPCIP00000046432	ENSPCIP00000038210	ENSPCIP00000046432	ATP-binding cassette, subfamily C (CFTR/MRP), member 10.	annotation not available	0.466
ABCC10	KATNAL2	ENSPCIP00000038210	ENSPCIP00000008056	ATP-binding cassette, subfamily C (CFTR/MRP), member 10.	Katanin p60 ATPase-containing subunit A-like 2 isoform X1.	0.494
ABCC10	KCNJ2	ENSPCIP00000038210	ENSPCIP00000032794	ATP-binding cassette, subfamily C (CFTR/MRP), member 10.	Potassium inwardly-rectifying channel subfamily J member 2.	0.425
ABCC10	KCNJ4	ENSPCIP00000038210	ENSPCIP00000018690	ATP-binding cassette, subfamily C (CFTR/MRP), member 10.	Potassium inwardly rectifying channel subfamily J member 4.	0.425
ABCC10	KCNJ5	ENSPCIP00000038210	ENSPCIP00000016069	ATP-binding cassette, subfamily C (CFTR/MRP), member 10.	Potassium inwardly-rectifying channel subfamily J member 5.	0.425
ABCC10	KCNJ8	ENSPCIP00000038210	ENSPCIP00000030135	ATP-binding cassette, subfamily C (CFTR/MRP), member 10.	Potassium inwardly-rectifying channel subfamily J member 8.	0.425
ABCC9	ENSPCIP00000033381	ENSPCIP00000030126	ENSPCIP00000033381	LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 9.	Potassium inwardly-rectifying channel subfamily J member 12/18.	0.494
ABCC9	ENSPCIP00000042425	ENSPCIP00000030126	ENSPCIP00000042425	LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 9.	annotation not available	0.782
ABCC9	ENSPCIP00000046432	ENSPCIP00000030126	ENSPCIP00000046432	LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 9.	annotation not available	0.466
ABCC9	KATNAL2	ENSPCIP00000030126	ENSPCIP00000008056	LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 9.	Katanin p60 ATPase-containing subunit A-like 2 isoform X1.	0.494
ABCC9	KCNJ2	ENSPCIP00000030126	ENSPCIP00000032794	LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 9.	Potassium inwardly-rectifying channel subfamily J member 2.	0.494
ABCC9	KCNJ4	ENSPCIP00000030126	ENSPCIP00000018690	LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 9.	Potassium inwardly rectifying channel subfamily J member 4.	0.467
ABCC9	KCNJ5	ENSPCIP00000030126	ENSPCIP00000016069	LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 9.	Potassium inwardly-rectifying channel subfamily J member 5.	0.518
ABCC9	KCNJ8	ENSPCIP00000030126	ENSPCIP00000030135	LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 9.	Potassium inwardly-rectifying channel subfamily J member 8.	0.988
ABCG5	ABCC10	ENSPCIP00000008287	ENSPCIP00000038210	ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1).	ATP-binding cassette, subfamily C (CFTR/MRP), member 10.	0.514
ABCG5	ENSPCIP00000042425	ENSPCIP00000008287	ENSPCIP00000042425	ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1).	annotation not available	0.514
ENSPCIP00000033381	ABCC10	ENSPCIP00000033381	ENSPCIP00000038210	Potassium inwardly-rectifying channel subfamily J member 12/18.	ATP-binding cassette, subfamily C (CFTR/MRP), member 10.	0.425