STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL11A1Collagen type XI alpha 1 chain. (1309 aa)    
Predicted Functional Partners:
ENSPCIP00000051900
annotation not available
 
 
 0.634
COL5A2
LOW QUALITY PROTEIN: collagen alpha-2(V) chain.
  
0.628
COL1A2
Collagen alpha-2(I) chain.
  
0.590
COL1A1
Collagen alpha-1(I) chain.
  
0.583
COL6A2
Collagen alpha-2(VI) chain isoform X1.
  
0.573
COL2A1
Collagen alpha-1(II) chain.
  
0.531
COL3A1
Collagen alpha-1(III) chain isoform X1.
  
 
0.480
COL6A1
Collagen alpha-1(VI) chain.
  
0.463
LYPLA2
Acyl-protein thioesterase 2.
    
 
 0.451
COL16A1
LOW QUALITY PROTEIN: collagen alpha-1(XVI) chain.
  
0.443
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.