STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM29Tripartite motif-containing protein 29. (582 aa)    
Predicted Functional Partners:
ENSPCIP00000046645
T-cell receptor-associated transmembrane adapter 1.
  
   
 0.650
ENSPCIP00000028525
annotation not available
  
  0.462
ENSPCIP00000021799
KRAB domain-containing zinc finger protein.
  
  0.461
ENSPCIP00000046226
annotation not available
  
  0.453
ENSPCIP00000052390
annotation not available
  
  0.451
ENSPCIP00000044619
annotation not available
  
  0.447
ENSPCIP00000046099
Lymphocyte antigen 6 complex locus protein D/E/F/G6/H.
   
  
 0.445
ENSPCIP00000053732
annotation not available
  
  0.444
BBOX1
Gamma-butyrobetaine dioxygenase.
      
 0.442
ENSPCIP00000051576
annotation not available
  
  0.438
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.