STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000044211annotation not available (270 aa)    
Predicted Functional Partners:
TNPO1
Transportin-1.
   
 
 0.871
TARDBP
TAR DNA-binding protein 43 isoform X1.
   
 0.786
SNRNP70
U1 small nuclear ribonucleoprotein 70 kDa isoform X1.
   
 0.694
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1.
   
 0.692
SRSF10
Serine/arginine-rich splicing factor 10 isoform X1.
   
 0.679
PRMT1
Protein arginine N-methyltransferase 1 isoform X1.
   
 
 0.651
ILF3
Interleukin enhancer-binding factor 3 isoform X1.
   
 
 0.642
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.618
SRSF2
Serine/arginine-rich splicing factor 2 isoform X1.
   
 0.613
SRSF1
Splicing factor, arginine/serine-rich 1.
   
 0.609
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.